NucPosDB is a manually curated database based on more than 400 publications reporting nucleosome maps in vivo across different cell types and conditions, cell-free DNA datasets in human patients and model organisms as well as software for computational analysis and modelling of nucleosome positioning as well as “nucleosomics” for medical diagnostics.
This is the most recent addition to the database, which is expanding quickly. It contains sequenced cell-free DNA (cfDNA) from body liquids such as blood plasma, urine, cerebrospinal liquid, etc.
This section of the database is devoted to experimental datasets such as MNase-seq, MNase-assisted H3 ChIP-seq, chemical mapping, etc, conducted in cells or tissues. Currently contains data from more than 200 publications.
This list currently contains 22 software tools for prediction of nucleosome positioning from DNA sequence based on biophysics or bioinformatics approaches